BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006E06LP1|AL425548
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1776 1736 0.0
>3x_Contig1776
Length = 26138
Score = 1736 bits (872), Expect = 0.0
Identities = 897/907 (98%), Gaps = 3/907 (0%)
Strand = Plus / Minus
Query: 1 cttgtttcttcttcataacttcgakggcagagctggattcatcgtcctgctgctcaggat 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 12907 cttgtttcttcttcataacttcgagggcagagctggattcatcgtcctgctgctcaggat 12848
Query: 61 ccaatttcgatttcttatcctccttcaattgccctttgctcttcttcttggcattccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12847 ccaatttcgatttcttatcctccttcaattgccctttgctcttcttcttggcattccatt 12788
Query: 121 gttcctgtgtcttgtcatcgtagtaatatttcgcaggtatcaacgaaagtwgcccttcaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 12787 gttcctgtgtcttgtcatcgtagtaatatttcgcaggtatcaacgaaagtagcccttcaa 12728
Query: 181 aggcgctagaattcgatttcaaccgttcttcaagagaattgctcatgtcagggtggattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12727 aggcgctagaattcgatttcaaccgttcttcaagagaattgctcatgtcagggtggattg 12668
Query: 241 gtacaactgagctgtgtwaatwatatccttcttwctaaacgaatcttagtactgataagt 300
||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 12667 gtacaactgagctgtgtaaataatatccttcttactaaacgaatcttagtactgataagt 12608
Query: 301 acattgctgtaagaacaagttaagtctctgtacctgtccggtgcgatgagctgaaaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12607 acattgctgtaagaacaagttaagtctctgtacctgtccggtgcgatgagctgaaaattt 12548
Query: 361 tctatatacggttttgagaatatcacgtatggtgaatctttgaggtttcttttctacagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12547 tctatatacggttttgagaatatcacgtatggtgaatctttgaggtttcttttctacagg 12488
Query: 421 gaaaattacaaaaaaaaaagaatacactttaaataagtcacgtgaccttagtcaaaacga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12487 gaaaattacaaaaaaaaaagaatacactttaaataagtcacgtgaccttagtcaaaacga 12428
Query: 481 gcggaagatgacttctgtatatacaatgtacagaagtactgtacagtaacagacttcaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12427 gcggaagatgacttctgtatatacaatgtacagaagtactgtacagtaacagacttcaac 12368
Query: 541 cattttattgttgccacatgtacaccatcattcttctagccatttgacaatgccctcata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12367 cattttattgttgccacatgtacaccatcattcttctagccatttgacaatgccctcata 12308
Query: 601 gccaatgatacttgcccccaatcattacccacggctcatctctcgaagccaaaaattgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12307 gccaatgatacttgcccccaatcattacccacggctcatctctcgaagccaaaaattgaa 12248
Query: 661 aatccaaaacaaatttctttttgttccagccgctacgtgaaaagaagaagctctaaaggc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12247 aatccaaaacaaatttctttttgttccagccgctacgtgaaaagaagaagctctaaaggc 12188
Query: 721 ctttcaattacttacttgatcactacagttaaaatagcccgtataaggaaaaatgactat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12187 ctttcaattacttacttgatcactacagttaaaatagcccgtataaggaaaaatgactat 12128
Query: 781 tcaaaatttttatgtttttccaagtttttttttttcttcag-tttttttttcaaaacttc 839
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 12127 tcaaaatttttatgtttttccaagtttttttttttcttcagttttttttttcaaaacttc 12068
Query: 840 tcacatttactttgtataaatatgtwatgggtacgattaatagtaa--ttttttcattct 897
||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 12067 tcacatttactttgtataaatatgttatgggtacgattaatagtaaattttttccattct 12008
Query: 898 tgttact 904
|||||||
Sbjct: 12007 tgttact 12001
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,971
Number of Sequences: 1807
Number of extensions: 15971
Number of successful extensions: 152
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)